PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52957.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 167aa MW: 19700.1 Da PI: 6.6798

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52957.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.6	6.6e-21	4	65	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L +lF++ r+p+++++++++++l +++ ++V++WFqN++a+e++ PHT52957.1 4 KCGRWNPTAEQVKVLTDLFRSgLRTPTTDQIQKISSQLsfygNIESKNVFYWFQNHKARERQ 65 568***************99************************************97 PP
2	Wus_type_Homeobox	113.2	1.3e-36	4	67	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L++l++sGlrtP++++iq+i+++L+ yG+ie+kNVfyWFQN+kaRerqk+ PHT52957.1 4 KCGRWNPTAEQVKVLTDLFRSGLRTPTTDQIQKISSQLSFYGNIESKNVFYWFQNHKARERQKR 67 678***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MGTKCGRWNP TAEQVKVLTD LFRSGLRTPT TDQIQKISSQ LSFYGNIESK NVFYWFQNHK 60 ARERQKRRRK VLVDEPINHI EDTIQLNNVS SSKHFQEIST TNRESDQADR VIETLQLFPL 120 HSLSEYSDTE KLRLFTEEYM RDNMTFSCTL EAEMDHPTLD LRLSFFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	5e-55	WOX family protein