PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53029.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 584aa    MW: 65636.9 Da    PI: 7.7505
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53029.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.93.3e-17881631798
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 ++p +fa+  ++   ++++  led+sg++W+v +  ++++g+  +++GW+ F +++gLk gDf+vF++++ + f  vv+++ 
  PHT53029.1  88 YFPPRFARLVSHL--TDQETYLEDSSGQRWRVGI--CNHKGSLAIRQGWRTFSSEHGLKMGDFLVFHYIRGQHF--VVQIYG 163
                 6788999777544..45689**************..*********************************97888..999876 PP
2B333.86e-114455301096
                 HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3  10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 v  ++ lvlp +  +   g kk + +t+ l+ +++r W v +    + g+ vlt++W+ F+   gLk gD ++F+l++ s++ ++v+v
  PHT53029.1 445 VDGRNFLVLPQSWPQVLsGRKKMGRITIYLKGPDNRPWPVIY--HETFGSKVLTGNWELFAAVYGLKPGDECLFQLSDLSKRMFNVHV 530
                 6677889999999855588889999*****************..999999*************************9765888777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    
MNNIVLVNRK WPHTASLGLQ HLFELEKSRA RNFRINCGLA IGFRWIFLDG LTLYGNAKNC  60
ERFDVQLQKL EEEEEKQGME CDTTRVNYFP PRFARLVSHL TDQETYLEDS SGQRWRVGIC  120
NHKGSLAIRQ GWRTFSSEHG LKMGDFLVFH YIRGQHFVVQ IYGTSGCEKI NFYNGTRTGK  180
KRPRTNSTAT SHDELSPETL INVRRKSNST PSDTAVPESQ RAGHQPVTTT FASNIDADTG  240
ERQIIPQEEG SNDVLQSENG PHNHTDTISQ RESSSVDGAP FEMEFLTLKA PSLDRDITQT  300
EKISEPVNDI SVLGQTDENG HHMGLISSIS LKSAENVAKG SHLACLCNKE SHCTSNNQVT  360
SEKSNEASQF GKETRVDMQE LKEMATKTHC PPKKLNGKEP KITEKDGQGY PESVIVNNMA  420
IKSVPADSGD TSISDDDSFS CSLQVDGRNF LVLPQSWPQV LSGRKKMGRI TIYLKGPDNR  480
PWPVIYHETF GSKVLTGNWE LFAAVYGLKP GDECLFQLSD LSKRMFNVHV AHKHHTLKQI  540
KVSKLQIEKV ALSLNPYCKN YQIMGLYFSM GKAVNLPKRE CHQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-09B3 family protein