PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53050.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 246aa    MW: 27911.9 Da    PI: 8.4865
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53050.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.4e-1272124155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                 rr  h  +Er+RR+++   ++ Lr+llP       ++K s ++   +Av+YIk++q
  PHT53050.1  72 RRIIHRDIERQRRQEMSALYSSLRSLLPLqY---IKGKRSVSDHMHEAVNYIKEMQ 124
                 6888*************************66...********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MFSLQGCSDN DLLIQILSNP CQQSKISQDQ VMDYASLEAI HTHPPNINAQ KKRQPKRKIG  60
NDENASDDFK LRRIIHRDIE RQRRQEMSAL YSSLRSLLPL QYIKGKRSVS DHMHEAVNYI  120
KEMQANIKEL ENRKDLLVKS SPLPNSIRRE TENGSTNSFI DCTVTVSPCH CGIQISLSVD  180
CKGKCFPLSK LLRELLKQGL NVVNCVSANA NQRSLYTIQT EACDMNNVDH LALQQKVTDM  240
ANSKDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.13e-41bHLH family protein