PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53059.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 352aa MW: 37209.8 Da PI: 6.3779

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53059.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.9	5.1e-36	75	170	3	98
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssg....ka 90 + k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++ ++ti WLl+ a+pai+++tgt++ +a ++ + ++s + ++ PHT53059.1 75 PVKRSSKDRHTKVEGRGRRIRMPAACAARIFQLTRELGHKSEGETIRWLLERAEPAIIAATGTGTVPAIAVsvngtlkI------PTTSPSTNnnegES 167 5699***********************************************************8888844432222221......11111111110111 PP TCP 91 aksaaksk 98 ++k PHT53059.1 168 -----STK 170 .....111 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MASVVNNQNI ELEDDEVNES KTLSADPLLG DSQEYTIAAV GVEPSRPPSS TDMVPFLKEE 60 PQELNMQLQK AEKQPVKRSS KDRHTKVEGR GRRIRMPAAC AARIFQLTRE LGHKSEGETI 120 RWLLERAEPA IIAATGTGTV PAIAVSVNGT LKIPTTSPST NNNEGESSTK RRKRPVNSEF 180 VEVHEASNFA PVAPIAPQGL VPVWPMASGN GHGLVSTTAI TGGTAAFYVL QPGTSTPTTY 240 AAGPHLWATP IFNVPTRPIS NFVSAMQPGI GYPAGVPVSA VASEVQLSTS PASKSDGLGT 300 VGSAIAPSSS STGATTQMLR DFPLEIYDKK KELQFMVGSG SSENDQASSS KS

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MASVVNNQNI ELEDDEVNES KTLSADPLLG DSQEYTIAAV GVEPSRPPSS TDMVPFLKEE  60
PQELNMQLQK AEKQPVKRSS KDRHTKVEGR GRRIRMPAAC AARIFQLTRE LGHKSEGETI  120
RWLLERAEPA IIAATGTGTV PAIAVSVNGT LKIPTTSPST NNNEGESSTK RRKRPVNSEF  180
VEVHEASNFA PVAPIAPQGL VPVWPMASGN GHGLVSTTAI TGGTAAFYVL QPGTSTPTTY  240
AAGPHLWATP IFNVPTRPIS NFVSAMQPGI GYPAGVPVSA VASEVQLSTS PASKSDGLGT  300
VGSAIAPSSS STGATTQMLR DFPLEIYDKK KELQFMVGSG SSENDQASSS KS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	3e-69	TCP family protein