PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53124.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 137aa    MW: 15256.1 Da    PI: 8.4509
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53124.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.1e-181361254
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkle 54
                +y+G+r++k +g+Wv+eIr+p     +   r +lg++ t+e Aa a++ a  +l+
  PHT53124.1 13 KYRGIRRRK-WGKWVSEIRVP-----CssERLWLGTYTTPEAAAIAHDIAYYCLR 61
                8*****998.**********8.....335***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MSSSDNEGAG SAKYRGIRRR KWGKWVSEIR VPCSSERLWL GTYTTPEAAA IAHDIAYYCL  60
RPKSSTSCLD KLNFPSMLPP NVQRGMSPRS VQKMASDSAI AIDAQFLTTA RPGQQDQTVD  120
NYGQNEALNI SVEDYLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.11e-42ERF family protein