PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53150.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB
Protein Properties Length: 279aa    MW: 31761.2 Da    PI: 5.9547
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53150.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.93.1e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l++++ ++G g+W++++   g+ R +k+c++rw +yl
       PHT53150.1 15 KGLWSPDEDDKLKNYIIKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP
2Myb_DNA-binding54.42.9e-1768113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg+++ eE++ ++ +++++G++ W+ Ia++++ gRt++++k++w++yl
       PHT53150.1  68 RGAFSLEEEDTILTLHAMFGNK-WSQIAQHLP-GRTDNEIKNHWHSYL 113
                      89********************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGCKAAEKPK QKHKKGLWSP DEDDKLKNYI IKHGHGCWSS VPINAGLQRN GKSCRLRWIN  60
YLRPGLKRGA FSLEEEDTIL TLHAMFGNKW SQIAQHLPGR TDNEIKNHWH SYLKKRVTKM  120
AENEGDTKSD NTESSPSLKN LTPQNSSLDS FEHREGSLAD SDQPIYPRES QKSNLPKVLF  180
AEWLSLDQFN GQEFHNSGNF EPSTDNFGYN NSELHDIFMH SLPMNNGSYG NGVNQEVNNG  240
TVVDDIFQAQ LKFEDPMSAN GFEEFMSGEF NINDDVMYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.11e-61MYB family protein