PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53296.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 354aa    MW: 38558.1 Da    PI: 6.1769
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53296.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.91.8e-13127177255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r +h  +Er+RR+++N+ ++ Lr+l+P     ++k+ + a+i   +v+YI++Lq
  PHT53296.1 127 RISHITVERNRRKQMNEHLSVLRSLMPCF---YAKRGDQASIIGGVVDYINELQ 177
                 889*************************9...9********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MDGDQNLSDL FEDSECDIFS ILDALEGGGG GGGGSYSEFN NNNTTITITT TTTTTSDEIT  60
GLVSEEGRKR KLVSQKSTGS SATLQEYSEE TDQADTPSNK RQNFAGVKSC GIIEGNNTNN  120
NNQQENRISH ITVERNRRKQ MNEHLSVLRS LMPCFYAKRG DQASIIGGVV DYINELQQVL  180
QSLEAKKQRK VYSEVLSPRL IPISPRVPSP LSPRKPPLSP RMNLPISPRT PQPTSPYKPN  240
HHNNANRPAA PITSSNSSID SHVNNELAAN SKSTIADVEV KFSGANVILK TVSPRIPGQA  300
VKIIAALEEL ALEILHVSIS TIDGTMLNSF TIKIGIECQL SAEELAHQIQ QTFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53210.13e-83bHLH family protein