PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53314.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 397aa    MW: 44789.6 Da    PI: 4.2859
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53314.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-19135184255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ kl+g
  PHT53314.1 135 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIKLRG 184
                 89*******.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MDYDMLCPIK YTEHRNVIRK VSKPSLIKSK KFPETSKSPQ YNPSVPRTVR ISVTDPDATD  60
SSSDEEEDQL FGRRRVKKYI NEISIEAAPI KCEVSSSTAK NSEKTMVNKR ALEALQVKQK  120
PMKVQTPQST STVRKFRGVR QRPWGKWAAE IRDPARRVRL WLGTYDTAEE AAMVYDNAAI  180
KLRGPDALTN FITPPKPAPE PEPEPEISVP SHSGYESGNE SRNIPSPTSV LRFRMSQSSE  240
ETDQQSQCPS VQGPMECEQT VQEVVEPLVQ NAEPLESVPQ QEDVEECQGE TSMIPDYSND  300
YLPTDVPFLE NYFNFEVPEQ TLFEDIPTTT TTTRSYPNNL GSSNNDISSL DFANDFLFND  360
DDFANFDDAF QDLGTLGVDD YFQDIVDYSS VDSLLAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-57ERF family protein