PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53330.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BBR-BPC
Protein Properties Length: 114aa    MW: 12799.3 Da    PI: 4.5888
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53330.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind53.31.2e-162166182228
   GAGA_bind 182 saderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnG 228
                 ++ +++ +++k  +l ln++++Des++Pv vCsCtG+++ CYkWG  
  PHT53330.1  21 KEADTQLTSWK-DNLWLNQINFDESAMPVMVCSCTGTPQPCYKWGHV 66 
                 22244555666.58*******************************75 PP
2GAGA_bind54.36.2e-1766114255301
   GAGA_bind 255 iagrKmSqgafkklLekLaaeGydlsnpvDLkd..hWAkHGtnkfvtir 301
                 ++grKmS+gaf+klL++ aa+ ydls p+DLkd    AkH tn++ t++
  PHT53330.1  66 VGGRKMSGGAFSKLLNHFAAQDYDLSIPLDLKDsdQLAKHDTNRYNTLK 114
                 89******************************73369********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    
MQVIATISDD QANLLEMDSD KEADTQLTSW KDNLWLNQIN FDESAMPVMV CSCTGTPQPC  60
YKWGHVGGRK MSGGAFSKLL NHFAAQDYDL SIPLDLKDSD QLAKHDTNRY NTLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21240.13e-24BBR-BPC family protein