PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53427.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 261aa    MW: 29231.9 Da    PI: 6.7906
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.41.4e-23169227259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  D+++WrKYG K   gs+f +sYYrC +  +Cp++++v++s++d + v++tY+g+H h+
  PHT53427.1 169 ADQWRWRKYGMKRTGGSPFLKSYYRCNQGvDCPARRHVQQSSTDSNKVIVTYRGQHSHP 227
                 59**************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAENQNDWDL WAIVRSCCNM NNSVHDDVIS FDNVNSTSVL VDHGVHEDPT HGNSANNART  60
STSFQEQSGC AGDFSDSFAT ENKHYFGLDE VLGLSKNVNT NSRIEPHNPE NQTESITDTP  120
LVEHEKNKNK NKKTRYSMSS SSIEAGKAFP YRGKSTERYE VLAEKLSEAD QWRWRKYGMK  180
RTGGSPFLKS YYRCNQGVDC PARRHVQQSS TDSNKVIVTY RGQHSHPPPN QHIATVQGNH  240
NAAAPVEDPP FPSSPSTLLF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-18WRKY family protein