PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53478.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 178aa    MW: 19848.9 Da    PI: 8.0026
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer87.31.5e-27863457
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegee..gtaaalkCaACgCHRnFHRrev 57
                   Y+eCl+NhAaslG++a+DGCgEf+ +++++  g + +l+CaACgCHRnFHR+ +
   PHT53478.1  8 DIYRECLRNHAASLGSYATDGCGEFTLDDHNTspGGSFSLNCAACGCHRNFHRKIT 63
                 57************************986655467799***************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MQGDKSNDIY RECLRNHAAS LGSYATDGCG EFTLDDHNTS PGGSFSLNCA ACGCHRNFHR  60
KITCGGASYS NDSRDDREVI IAADYCLATQ ESPAVSERSG KKRFRTKFTT DQKEKMLAFA  120
EKLGWTLQRK DEENETERFC KEVGVSRKVF KVWMHNHKNN SSSVSSNITA NNASSLTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.17e-39ZF-HD family protein