PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53848.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 583aa MW: 65652.6 Da PI: 4.793

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.7	1.6e-07	529	562	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ ++ LA+++gL+ +q+ +WF N+R ++ PHT53848.1 529 WPYPTEVDKVFLAESTGLDPKQINNWFINQRKRH 562 59*****************************885 PP
2	ELK	21.6	5.3e-08	482	503	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 E+K+ L+ KYsgy+ sLk+ F+ PHT53848.1 482 EIKDKLMGKYSGYITSLKHNFC 503 89****************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 583 aa Download sequence
MDYVEAQENY GIEEENEVDA VNLDEDNENI AETPAVGDAN VRSESVNLPS RPPSAPKPRK 60 XTPAVGDANV RSESVNLPHR PPSAPRPRKR TSIAWPFFEC ISXFFERISD IEVQCNICQQ 120 IYKHKSGGKQ GGTGTLMRHV AEDHKRELNI AKGGGDVDGP TQTRMDPATG HVAKKCNTLR 180 DREEIAKMVA VGCLPFNFPS SGAFIRYIQA IYNPMFNDYV MREMYEFGSS SSSDGGGYYS 240 DDHYNFQAME YIEWPPAFRD GTVTLAVDSS PNLQEDQKNI QAKISSHHLY PMLLLSHIDC 300 HKVGAPPEIV NMLDNIVQEN DLYRKSSCSS NTSLNQLMVN DDSELDEFMV GAPPEIVNML 360 DNIVQENDLY RKSSCSSNTS LNQLMVNDDS ELDEFMATYC DVLAKFKSDL TMCFNESATF 420 LNNVQSQLTN LCTTTNISEK GAEAVAEVEA EESDTNGGGE ANNENELKGS STSDEMCRRR 480 SEIKDKLMGK YSGYITSLKH NFCKKNNKGK LPREATKILL NWWNTHYNWP YPTEVDKVFL 540 AESTGLDPKQ INNWFINQRK RHWKPSDNMQ FAVMETIHGH FSQ

Sequence ? help Back to Top

Protein Sequence Length: 583 aa Download sequence

MDYVEAQENY GIEEENEVDA VNLDEDNENI AETPAVGDAN VRSESVNLPS RPPSAPKPRK  60
XTPAVGDANV RSESVNLPHR PPSAPRPRKR TSIAWPFFEC ISXFFERISD IEVQCNICQQ  120
IYKHKSGGKQ GGTGTLMRHV AEDHKRELNI AKGGGDVDGP TQTRMDPATG HVAKKCNTLR  180
DREEIAKMVA VGCLPFNFPS SGAFIRYIQA IYNPMFNDYV MREMYEFGSS SSSDGGGYYS  240
DDHYNFQAME YIEWPPAFRD GTVTLAVDSS PNLQEDQKNI QAKISSHHLY PMLLLSHIDC  300
HKVGAPPEIV NMLDNIVQEN DLYRKSSCSS NTSLNQLMVN DDSELDEFMV GAPPEIVNML  360
DNIVQENDLY RKSSCSSNTS LNQLMVNDDS ELDEFMATYC DVLAKFKSDL TMCFNESATF  420
LNNVQSQLTN LCTTTNISEK GAEAVAEVEA EESDTNGGGE ANNENELKGS STSDEMCRRR  480
SEIKDKLMGK YSGYITSLKH NFCKKNNKGK LPREATKILL NWWNTHYNWP YPTEVDKVFL  540
AESTGLDPKQ INNWFINQRK RHWKPSDNMQ FAVMETIHGH FSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-64	TALE family protein