PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54177.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 93aa    MW: 10263.6 Da    PI: 9.4854
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA26.31.1e-082181834
        GATA 18 gnktLCnaCGlyyrkkg 34
                g+ktLCnaCG++y+k +
  PHT54177.1  2 GPKTLCNACGVRYKKGR 18
                89*************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MGPKTLCNAC GVRYKKGRLY PEYGPAASPT FVPSLHSNSH KVMEMRSNVF PDDTQYYKLP  60
KPSRAPPLTI GQAENTTTTS STLTAQFDNV KPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.27e-23GATA family protein