PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54246.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 209aa MW: 22944.1 Da PI: 6.0082

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54246.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	171.6	9e-54	71	165	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian++rimkk lP+naki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddl+wal+tlGfedy+eplk yl +yre ++ PHT54246.1 71 VREQDRYLPIANIGRIMKKGLPTNAKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLIWALTTLGFEDYIEPLKGYLIRYREGDT 165 69*****************************************************************************************9665 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MDCVHLTLPR PHYVGIHWVC CCCCLFNVVC LCFRILLLVL LSMAEVPASP GGGGASHESG 60 GGDEQSPQSN VREQDRYLPI ANIGRIMKKG LPTNAKIAKD AKDTVQECVS EFISFITSEA 120 SDKCQKEKRK TINGDDLIWA LTTLGFEDYI EPLKGYLIRY REGDTKGSVR AGDTSARKDI 180 VGGHLGPSSQ QFVYDGSFTQ DLDYGNSQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	2e-67	NF-YB family protein