PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54335.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 239aa    MW: 26768.9 Da    PI: 7.8548
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.23.9e-3350103357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                  k +YkeClkNhA+s+GghavDGCgEf+ps ge+g++++lkCaAC+CHRnFHR+ +
   PHT54335.1  50 KPKYKECLKNHAVSIGGHAVDGCGEFLPS-GEDGSIDSLKCAACNCHRNFHRKIT 103
                  679*************************9.999*******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MEYEDQQKQT EEPSPNYPTT TKMSPSPQLQ LEPVQLEPVQ LWTGSSTATK PKYKECLKNH  60
AVSIGGHAVD GCGEFLPSGE DGSIDSLKCA ACNCHRNFHR KITQPPPFTA GSGGGEPGPF  120
VYYRSIPPPP PPYGYLQYHV ATHQRPLALP STSGGGYRED QEDIYNPNYS GGSGAKKRFR  180
TKFSQEQKDK MQEVADKLGW RIQREDEDLV QQLCNETGIT RQVFKVWMHN NKHTLGKKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-63ZF-HD family protein