PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54373.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 332aa    MW: 35760.6 Da    PI: 5.0363
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like29.12.2e-09229253125
     G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                 kpr+rWtpeL e Fveav++LGG e
  PHT54373.1 229 KPRMRWTPELLEVFVEAVSKLGGGE 253
                 79*********************87 PP
2Myb_DNA-binding22.42.9e-07231252122
                      TSSS-HHHHHHHHHHHHHTTTT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg 22 
                      r+rWT+e+ e +v+av +lGgg
       PHT54373.1 231 RMRWTPELLEVFVEAVSKLGGG 252
                      89******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MNMRRALCIQ RSSEAQHSNM GVSGATSTSS NLIPSQAIPS ASKSRTVGHL LSLTSGPHKD  60
FNFCSTSSQE SRQHNYPFIS SEASAATCRS SLSSIHSTSF DNWPIGNDSN SSGKDAYHDL  120
INFPTNDPVQ NGQVESLAVV MPSDNQAKRS DWQEWADQLI NDDDDDGLGS SWSDILVDIS  180
PPEIKFLETS EVLACETHIL PSPAAVVAAA SSGQSYPVGS PSSTTALTKP RMRWTPELLE  240
VFVEAVSKLG GGESTSYAKG SLEDHERRRP NHLSRQKPLA VSSACVISMP DFEIHGDCNL  300
LIAGTSEKKP TSVIEMPSLD LKTPNACHTE NL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.47e-16G2-like family protein