PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54381.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 394aa    MW: 43877 Da    PI: 6.5172
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54381.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.91.9e-21155204255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae+Aa+a+++a++k++g
  PHT54381.1 155 RYRGVRQRP-WGKWAAEIRDPY----KaTRVWLGTFDTAEDAARAYDEAALKFRG 204
                 7********.**********76....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    
MCIFKVANHR KKGDYKPITI RNDDEDHEGG MINNNVMFSG NINREEEMSV MVSALTRVVT  60
GEDRILNQEN NNSNNIIIGS SSLNEFSGGV GEKRGREEHQ YFLSDISSSS GGEDSSNSKT  120
IASNTPTKES TFIYITPTYD HNTTNIIDYN QPRRRYRGVR QRPWGKWAAE IRDPYKATRV  180
WLGTFDTAED AARAYDEAAL KFRGSKAKLN FPENVRLLPT SSTPRQNDVS NTGYPMEKQF  240
LAGTFPNDPM ENNNNVEFLT DTFPKNSMGN THVSSIVSPN DSPNTLSTLS FFPSSNPIVH  300
TQLPNSNINP PFFLNDDFQM VHSSSSLLNQ SMFSTTFQYS SSSSSSSSSS SSSRVPFVPN  360
MYFHGGSQRT SQSSECDFRA TSSDSAHHPS SSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43160.11e-20ERF family protein