PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54449.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 362aa MW: 40498.9 Da PI: 4.087

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54449.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43	8.2e-14	101	188	1	96
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 ffk+ ++++++k++ +p +f++e+g + + ++le ++g +W+vkl ++++g+++l++GW++F + + g f++F+++g+s+f v + PHT54449.1 101 FFKIILSPHASKLH---IPSEFIAEYGAS--LGDAVSLEIPNGVVWKVKL-QKNSDGMVWLKEGWNKFKEYYTIACGYFLLFRYKGNSQF--SVFI 188 78888777877766...*******976..7779***********.3555666**************************9999..5555 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MQNFDITLPQ EQQPAEMVDR REEQPPEMVD RREVNPAEMA DRQEEQPPEM VDSRPTEMVG 60 RREVNPAEMA DRREEQAAGM EDRRGQEEPR PVDTPEINAH FFKIILSPHA SKLHIPSEFI 120 AEYGASLGDA VSLEIPNGVV WKVKLQKNSD GMVWLKEGWN KFKEYYTIAC GYFLLFRYKG 180 NSQFSVFIFD LTSTEIEYPP GPNDEDTTPD NRSVAFNPPG PNEDTTPDNR SVAVDPPGPN 240 EATTPDNRSV AFDPPGPNGD TIPDNRSVAV DLPGPNEATS PDNPSVAFEP PEENRINLPL 300 SSEPPDENVI NSSLPIEPRV ENVINLPPPR EPPEENAINL PPPGIYTIEE LSRAFMLSQP 360 KV

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MQNFDITLPQ EQQPAEMVDR REEQPPEMVD RREVNPAEMA DRQEEQPPEM VDSRPTEMVG  60
RREVNPAEMA DRREEQAAGM EDRRGQEEPR PVDTPEINAH FFKIILSPHA SKLHIPSEFI  120
AEYGASLGDA VSLEIPNGVV WKVKLQKNSD GMVWLKEGWN KFKEYYTIAC GYFLLFRYKG  180
NSQFSVFIFD LTSTEIEYPP GPNDEDTTPD NRSVAFNPPG PNEDTTPDNR SVAVDPPGPN  240
EATTPDNRSV AFDPPGPNGD TIPDNRSVAV DLPGPNEATS PDNPSVAFEP PEENRINLPL  300
SSEPPDENVI NSSLPIEPRV ENVINLPPPR EPPEENAINL PPPGIYTIEE LSRAFMLSQP  360
KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-24	B3 family protein