PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54510.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 238aa    MW: 27902.8 Da    PI: 9.3471
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.46.4e-35301212102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y ++e++++++++sw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++         weF++++Fkkgk++ll++i+
    PHT54510.1  30 FLLKTYMLVENPATDDIVSWNSDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVTTSR---------WEFSNDKFKKGKRDLLCDIH 117
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    PHT54510.1 118 RRKA 121
                   *985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEVLEEVQMS DHDKSLLDYV VMRKSSPSPF LLKTYMLVEN PATDDIVSWN SDGSAFVVWQ  60
PAEFARDLLP TLFKHSNFSS FVRQLNTYGF RKVTTSRWEF SNDKFKKGKR DLLCDIHRRK  120
AWTNNNNNNK KDLEEDQSST SNSSSQYINL VDENKRLKME NGVLNSELSL MKNKCKELID  180
IVSIFAKSNS EKNEEKKKKD ERPMLFGVRL EVQEEMERKR KRIELNKIAN IFISQLCK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.19e-60HSF family protein