PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54791.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 259aa    MW: 29911.1 Da    PI: 9.2652
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54791.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57382.65.6e-2677165397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 fqr wsee ei++LqG +++   ++++ps+d  af  fvk+ ++ + +k+ql  K+ rLK+K+k++ +k       +fsk+h++k f++s+kiWg
  PHT54791.1  77 FQRAWSEEEEIAILQGHLNYSFLKNTEPSSDYGAFLTFVKDDLQTETNKTQLQHKLTRLKRKYKRNIEK------RKFSKPHEEKLFKFSEKIWG 165
                 9******************************************************************99......89*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MLIISCSGVF YLKQKPTKAN CIPKLSEMAA RNIFKSLKAK RPHGDSDKEW TPSSEDSQTY  60
SPEEVIMESC NVNKSGFQRA WSEEEEIAIL QGHLNYSFLK NTEPSSDYGA FLTFVKDDLQ  120
TETNKTQLQH KLTRLKRKYK RNIEKRKFSK PHEEKLFKFS EKIWGAVDQV RNKVDDKTSG  180
KMIVDASSWD FVLNGGTAAD LEDWFRRNPR QLISEKERNE MLEKSQSVKV AKARQYLLEI  240
QVMEEQAKMA TDAIQAILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.15e-18GeBP family protein