PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54870.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TALE

Protein Properties

Length: 682aa MW: 75409.3 Da PI: 6.5094

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54870.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	496	533	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV +WF N R + PHT54870.1 496 FEHflHPYPSDADKHLLARQTGLSRNQVANWFINARVR 533 664559******************************88 PP
2	BELL	108.9	3e-35	358	428	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r ++q++k kLls+l+e +krY++y+eq+q+v++sF+ v+g g+a pYt+lA+ka+SrhF+cLk ia q+ PHT54870.1 358 RLDHQRRKFKLLSMLDEAYKRYNHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFKCLKGGIAAQL 428 6789****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MSQDYHDQSL ASFSSGFERL QDEEQQQQQH IAHQIHREKL RVEGLESPLS LVGVEEEGES 60 SGIQVYETDG MLSEMFNFQT TATASSATEL LQNQLSHNYR HPNQVPHHHQ EQPPNTNLGN 120 EWFANQQVVV VGGSLQVPFG DAKDHVDAKV LSNHDSVTAH YQRQHNQVPR TYTAESMQLF 180 LMNPHPRSAS QSPSQPTSSN LHGFPSQATG GHFGQFICGG ASNSNSIGGV NVIEGQGLSL 240 SLSSTLQHLE ATKVEELRMS GGGEMLFYNQ ESQNHRQFHH IGYGSSLGLV NVLRNSKYAK 300 AAQELLEECC SVGRGQLFKK TNKVSKNNNT KSASNPSGSK NNPSSSKDNP PNLSASDRLD 360 HQRRKFKLLS MLDEAYKRYN HYCEQMQMVV NSFDLVMGFG AAVPYTALAQ KAMSRHFKCL 420 KGGIAAQLKQ SCELLGEKDA STSGLTKGET PRLKVLEQSL RQQRAFQQMG TMEQEAWRPQ 480 RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSR NQVANWFINA RVRLWKPMVE 540 DMYQREAIED DDDMQNQNST TNAQTPTPNI ITNSNTQTFG SDEKSQSNAP ENDPSIVALN 600 SHISSSMPTQ TTNFPTIQDS DDTLPHGGAV SGGGEYGTTN VANNSEIGST MIRFGTAVAG 660 DVSLTLGLRH AGNLPEDTHF FG

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MSQDYHDQSL ASFSSGFERL QDEEQQQQQH IAHQIHREKL RVEGLESPLS LVGVEEEGES  60
SGIQVYETDG MLSEMFNFQT TATASSATEL LQNQLSHNYR HPNQVPHHHQ EQPPNTNLGN  120
EWFANQQVVV VGGSLQVPFG DAKDHVDAKV LSNHDSVTAH YQRQHNQVPR TYTAESMQLF  180
LMNPHPRSAS QSPSQPTSSN LHGFPSQATG GHFGQFICGG ASNSNSIGGV NVIEGQGLSL  240
SLSSTLQHLE ATKVEELRMS GGGEMLFYNQ ESQNHRQFHH IGYGSSLGLV NVLRNSKYAK  300
AAQELLEECC SVGRGQLFKK TNKVSKNNNT KSASNPSGSK NNPSSSKDNP PNLSASDRLD  360
HQRRKFKLLS MLDEAYKRYN HYCEQMQMVV NSFDLVMGFG AAVPYTALAQ KAMSRHFKCL  420
KGGIAAQLKQ SCELLGEKDA STSGLTKGET PRLKVLEQSL RQQRAFQQMG TMEQEAWRPQ  480
RGLPERSVNI LRAWLFEHFL HPYPSDADKH LLARQTGLSR NQVANWFINA RVRLWKPMVE  540
DMYQREAIED DDDMQNQNST TNAQTPTPNI ITNSNTQTFG SDEKSQSNAP ENDPSIVALN  600
SHISSSMPTQ TTNFPTIQDS DDTLPHGGAV SGGGEYGTTN VANNSEIGST MIRFGTAVAG  660
DVSLTLGLRH AGNLPEDTHF FG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-132	TALE family protein