PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54917.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 438aa MW: 48461.5 Da PI: 6.1774

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54917.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.8	7e-31	210	268	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ PHT54917.1 210 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 268 699**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MTNNYQGDLA DIFRGGNSTT SGDQSSTSVV PVPDGWQFPS INYSASVIEE PTASLVQDFG 60 DPFCNLRDPL LFHDLDMIPQ ASSSLFNPTQ ENNNHFGPNI DSPSMKIRRP NIFSRMLQIS 120 PTTKLAISPC DIACSSPNSN VNVIGALVPT QDAIISPNSS KTCLVENSGL QISSPRNTGI 180 KRRKCQAKKV VCIPAPAPAN SRQGGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG 240 CSARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNALAGST RSQPNNSKHT TTSKNNTNIM 300 PNNSQYQGDT SFNEDEQNER NINHDNNVAQ ANISTYPKVK EEVAEEDLQQ QLGEMRNVEF 360 SKGSYQPILT DSSNQCHEDF FADLVELEAD PLNFLFANTL SGDINEVGQK KAIDAFNLYN 420 WSKDRNTNIN NKGTQADT

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MTNNYQGDLA DIFRGGNSTT SGDQSSTSVV PVPDGWQFPS INYSASVIEE PTASLVQDFG  60
DPFCNLRDPL LFHDLDMIPQ ASSSLFNPTQ ENNNHFGPNI DSPSMKIRRP NIFSRMLQIS  120
PTTKLAISPC DIACSSPNSN VNVIGALVPT QDAIISPNSS KTCLVENSGL QISSPRNTGI  180
KRRKCQAKKV VCIPAPAPAN SRQGGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG  240
CSARKQVERS RTDPNMLVIT YTSEHNHPWP TQRNALAGST RSQPNNSKHT TTSKNNTNIM  300
PNNSQYQGDT SFNEDEQNER NINHDNNVAQ ANISTYPKVK EEVAEEDLQQ QLGEMRNVEF  360
SKGSYQPILT DSSNQCHEDF FADLVELEAD PLNFLFANTL SGDINEVGQK KAIDAFNLYN  420
WSKDRNTNIN NKGTQADT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34830.1	9e-85	WRKY family protein