PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54949.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 210aa MW: 22689.3 Da PI: 8.0531

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54949.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49.7	6.3e-16	18	78	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+++++eq+ +Le+ F++ +p ++e ++ + l ++ +++V++WFqNrR + ++ PHT54949.1 18 RSRWNPKPEQILILESIFNNgMVNPPKDETVKIREILeqfgSVGDANVFYWFQNRRSRSRR 78 89***************99***********************************997 PP
2	Wus_type_Homeobox	106.3	1.9e-34	17	80	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RW+P+peQi iLe+++++G+++P+k+e+ +i++ Le++G ++d+NVfyWFQNr++R+r++q PHT54949.1 17 VRSRWNPKPEQILILESIFNNGMVNPPKDETVKIREILEQFGSVGDANVFYWFQNRRSRSRRRQ 80 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MEDSTSSNQS CERNEPVRSR WNPKPEQILI LESIFNNGMV NPPKDETVKI REILEQFGSV 60 GDANVFYWFQ NRRSRSRRRQ RQIQASLSAV EVGGEQSSRG GAIQFHTSTA NVGPPSISFP 120 MAAPAPSSYL LLGSSSSSSS PGGAVGNAND GLFPFSGQMG LPQVEQNSSI SSILCSSPTD 180 NANLHYQTGI NIALAQVPKI ICANIVLNYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	2e-32	WOX family protein