PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55053.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 155aa    MW: 17496.3 Da    PI: 8.8826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.1e-181059255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+W+AeIr p+    + +r++lg+f+ ae+Aa a+++a+ +++g
  PHT55053.1 10 HYRGVRQRP-WGKWAAEIRNPK----KaARVWLGTFDRAEDAALAYDEAAVRFKG 59
                7********.**********84....45**********************99877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MLGSGSGRRH YRGVRQRPWG KWAAEIRNPK KAARVWLGTF DRAEDAALAY DEAAVRFKGS  60
KAKLNFPERL VQGQPQLLSQ DTSPQHNSHH FEEFNTASAT GISYPHLLQY AQLLSSNDAE  120
FPFFTSALYN NKQDGSTSNI LQQHDFPSQH DDFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-32ERF family protein