PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55063.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 254aa MW: 29392.2 Da PI: 7.6538

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55063.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	143.1	1.6e-44	8	137	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 pGfrFhPt+eel+++yLk+ ++++kl+ ++i ++iy ++Pw+Lp +k+ ++e+ewyfF++ ++k+ + ++nr+t++g+Wkatg+d+++ s PHT55063.1 8 LPGFRFHPTEEELINFYLKRIIDDNKLDS-NIIGFLNIYLSDPWELPglAKLGEREREWYFFVPINRKHGPKGKPNRTTRNGFWKATGSDRPIRSYldP 105 59***********************99.89***********6448888899********************************998878 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +glkktLvfy grapkg++tdWvm+eyrl PHT55063.1 106 KKIIGLKKTLVFYGGRAPKGSRTDWVMNEYRL 137 889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MSPAELKLPG FRFHPTEEEL INFYLKRIID DNKLDSNIIG FLNIYLSDPW ELPGLAKLGE 60 REREWYFFVP INRKHGPKGK PNRTTRNGFW KATGSDRPIR SYLDPKKIIG LKKTLVFYGG 120 RAPKGSRTDW VMNEYRLPDE HKDHDIVLCK VYRKATSFKE LEQRATVEED TAKTYMPTRH 180 ESQDILGSLE SSKNDMYFKS CEEENYHTTL TLPQLSGSNA FVEPSKFSID SLSSPLWTEL 240 QNAGQDFWSL SSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	5e-77	NAC family protein