PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55152.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 812aa    MW: 91066 Da    PI: 9.8921
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55152.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B346.85.2e-1525109494
                 E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                  + ps+ ++  +l++  kfa+++ +++ +   l+l  +   sW+v +  + +sg     +GWk Fv +n+Lk+gD+++F++++  +  l+v
  PHT55152.1  25 FMQPSYISTPFNLSIALKFARKYFLENDG--NLVLHVPGRGSWSVIC--TIGSGNAKVHSGWKAFVLENELKVGDVCIFEVIKGAQ--LFV 109
                 466788888899***********777545..6***************..99999999***********************886433..344 PP
2B350.15e-16279366596
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 + ps+v++  +l ++ +fa+++ +++ +   l+l  + + sW+vk+  + +s+     +GWk Fv +n+Lk+gD++vF++++  +    v++
  PHT55152.1 279 MQPSYVSRPYILNISSTFARKYFLENDG--YLVLCVPGSGSWSVKY--TICSKNAKVHSGWKAFVIENKLKVGDVCVFEVSKGAQLFVDVTI 366
                 679999999*************877544..79**************..888888899**********************7654443345555 PP
3B346.56.4e-15542631598
                 -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 + ps+v+k  +l+++  fa ++ ++k +  +l+l+ +   sW+vk+  + + ++  ++  WkeFv++n+Lk gD++vF+l++ ++  + v++fr
  PHT55152.1 542 MQPSYVSKPYNLRISFLFAWKYFLEK-C-GDLVLRVPGRGSWSVKY--DLGVSAARIQFTWKEFVQDNKLKIGDVCVFELIKGTQPIFDVTIFR 631
                 67999****99***********9885.4.38***************..555555556666********************97666656777777 PP
4B342.71e-137248031394
                 TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 + rl++  + a+++ ++ ++++ l++ +++  +W vk++   +     +++GW eFv +n+Lk+gD++vF+  +rse  ++v
  PHT55152.1 724 QMRLIIMLSVARKFFSSRHSEVVLQVSSKREIQWAVKCTLGIS--NAKFSAGWMEFVLDNNLKVGDVCVFEWANRSELLFNV 803
                 4788999999999977777888899999999*******55333..45599*********************76666654444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    
MDKESSTAYQ KAKAFKSKNP FIISFMQPSY ISTPFNLSIA LKFARKYFLE NDGNLVLHVP  60
GRGSWSVICT IGSGNAKVHS GWKAFVLENE LKVGDVCIFE VIKGAQLFVD VKIFHAAGNT  120
LMHNIVGEIP VGSDSKSKVI LIDNSGPCSR PKVVHREKLK LQTRGSCDLS SKIKEEHGEG  180
TEIEHSAEIL GHYSSGQSSK RNRLEVDSED DAVENPQEHV ASPSLTRNTK KSGGSCGMHK  240
QQSKISYDKN KKAMDKEKAI AYQRAKAFKS KSPFIICFMQ PSYVSRPYIL NISSTFARKY  300
FLENDGYLVL CVPGSGSWSV KYTICSKNAK VHSGWKAFVI ENKLKVGDVC VFEVSKGAQL  360
FVDVTIFRAA GSTLMHNIVE ESSGGSDSKS KFIKTDNSVP CFQPKVVQTE KLKQKTGGSY  420
DLNSKIKEEH GEGTEMEHSI KILGRCPLGH GSKRKRHEGE AEDDVSIGIH TKSIKVEKSL  480
EDVASPSFTR KPKKSGESCR MHKQQTEMVY AVNMTVLGKE RTRAYQRAKA FKSKNPFVIY  540
FMQPSYVSKP YNLRISFLFA WKYFLEKCGD LVLRVPGRGS WSVKYDLGVS AARIQFTWKE  600
FVQDNKLKIG DVCVFELIKG TQPIFDVTIF RGSEKKSMHK INEGVSNCDN KMVKIENSVP  660
CSQPKIVHRR KLNLEEKQKE ELSEGTVIAK EMVMAYQKAK SFTSTNPFFI CVMHPSYVSP  720
ARGQMRLIIM LSVARKFFSS RHSEVVLQVS SKREIQWAVK CTLGISNAKF SAGWMEFVLD  780
NNLKVGDVCV FEWANRSELL FNVIIFPSAE GI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-20B3 family protein