PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55153.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 215aa    MW: 24727.7 Da    PI: 4.6501
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55153.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92.1e-149871498
                T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                +   +pk+fa+++ ++  ++  + le +sg++Wev++  + + g+++l+kGW++F++   +  g f++F+++ rs    +v +f+
  PHT55153.1  9 CTQKIPKDFASRYCKNMLNP--VYLEVPSGEVWEVEV--EHSEGQMWLSKGWQDFCDYYSISCGHFLMFEYNARSHY--NVIIFD 87
                5568*********5454444..***************..99999**************************9876555..676665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MKLSPDFLCT QKIPKDFASR YCKNMLNPVY LEVPSGEVWE VEVEHSEGQM WLSKGWQDFC  60
DYYSISCGHF LMFEYNARSH YNVIIFDLSA AEIEYPYSSA YGIRTIHCQG THHAPSTDQP  120
EPDDSVDILE GITRSQKLKE KNPDLVERLL DNKGHCPLGQ SSKRKRHDGD TEDDISIDMH  180
IKRMEVEKSQ EDIDSPSFTR EGQSEDLISI LLAMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-18B3 family protein