PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55191.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 469aa MW: 51488 Da PI: 4.7656

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55191.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.9	2.6e-39	116	175	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PHT55191.1 116 PDKILPCPRCNSMETKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNS 175 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSELKDPAIK LFGRTIQLPD VPDSSETMLE DSLPEEANGE EEDVEDQKDN IGGNLDDEED 60 EMEILTGKEL QDQNSHPTKT DSIKVQPVDS DCSTRPSKSE EQGEASNSQD KILKKPDKIL 120 PCPRCNSMET KFCYFNNYNV NQPRHFCKNC QRYWTAGGTM RNVPVGAGRR KNKNSIPHYR 180 QISVSETLPS AQADYPNGIQ QPVLAFGSPT PLCESMASVL NIADKTMHNC SQNGFHKPPD 240 PGVPVSYGAG DNGDDHSRRS SVTTANSEDE VSKIVPDQLK NCHNFPPYVA CYPGAPWPYP 300 CNSVPWSSAV PPPGYCPPGF PMPFYPAASY WGYNVAGSWN VPWISPTTGS LIQTPPTSGP 360 NSPTLGKHSR DENILKQLSN KEESSKESNP EKCLWVPKTL RIDDPREAAK SSIWATLGIK 420 HDSVESVGGS PFNAFQPKND DNISVSENST VLQANPAALS RSVNFNESL

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSELKDPAIK LFGRTIQLPD VPDSSETMLE DSLPEEANGE EEDVEDQKDN IGGNLDDEED  60
EMEILTGKEL QDQNSHPTKT DSIKVQPVDS DCSTRPSKSE EQGEASNSQD KILKKPDKIL  120
PCPRCNSMET KFCYFNNYNV NQPRHFCKNC QRYWTAGGTM RNVPVGAGRR KNKNSIPHYR  180
QISVSETLPS AQADYPNGIQ QPVLAFGSPT PLCESMASVL NIADKTMHNC SQNGFHKPPD  240
PGVPVSYGAG DNGDDHSRRS SVTTANSEDE VSKIVPDQLK NCHNFPPYVA CYPGAPWPYP  300
CNSVPWSSAV PPPGYCPPGF PMPFYPAASY WGYNVAGSWN VPWISPTTGS LIQTPPTSGP  360
NSPTLGKHSR DENILKQLSN KEESSKESNP EKCLWVPKTL RIDDPREAAK SSIWATLGIK  420
HDSVESVGGS PFNAFQPKND DNISVSENST VLQANPAALS RSVNFNESL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	2e-92	Dof family protein