PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55200.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 216aa    MW: 24502.2 Da    PI: 6.3606
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63e-183482355
         AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                + GVr+++ +grWvAeI+d      ++ r++lg+f+t eeAa+a+++a+  l+g
  PHT55200.1 34 FVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTSEEAARAYDEAACLLRG 82
                78******.7*********33....35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MARKRKAEGL TKTQDDNGNV ADAAAGAQQP RKIFVGVRQR PSGRWVAEIK DTIQKIRVWL  60
GTFDTSEEAA RAYDEAACLL RGASTRTNFW PCSSSSTSTL PPKILNILLS RLREQNKSVA  120
ATDDDSSNST SLPEIGHQQQ QHQEEKLVDR VADFSYALYT DYLYYPEDHI TDNYVITQNG  180
YNQEFNIQPV NNYKSSNAEI IEILTKLDHF TIRHFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-31ERF family protein