PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55228.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 124aa    MW: 14207.3 Da    PI: 9.8627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55228.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.30.000313241031
                HHHHHHHHHHHHHHHCTSCCC. CS
         HLH 10 rrRRdriNsafeeLrellPkas 31
                rrRR+r  s++++L ++lP+  
  PHT55228.1  3 RRRRSRPSSKIQKLVKILPTYL 24
                9******************953 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MSRRRRSRPS SKIQKLVKIL PTYLDMSGFL DQKVRTDWSK IEAYRDKMAN PFNAQYVDRI  60
AQQTIGILDC GLFVAAYAEY FSDGLQVPND GLDAGLLHKR YAALLWKYGE AKTHKSYATD  120
VKDP