PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55243.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Dof
Protein Properties Length: 192aa    MW: 20858.3 Da    PI: 8.8032
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55243.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.29.8e-402686262
      zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                ++++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lr++P+Ggg+rkn k+s
  PHT55243.1 26 PDQQLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDIPIGGGSRKNAKRS 86
                7899*****************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MTLEASEKRV TTQQTAGGVL PPAQEPDQQL PCPRCDSTNT KFCYYNNYNL SQPRHFCKSC  60
RRYWTHGGTL RDIPIGGGSR KNAKRSRIYT STPFSSSTAV SPHGNSPFLV PLPTANQLLF  120
GSDVKPCLNM SGNNFTSLLS SHGPTGVLSL GGIEDVSFSI GRAAVWPFPG APDSYIRNYD  180
SDVGASMWQF SG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.12e-43Dof family protein