PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55370.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 194aa    MW: 21883.2 Da    PI: 4.4887
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM41.25.2e-1367108850
         NAM   8 hPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50 
                 hPtdeel+++yL kkv ++++++ ++i+evd++k+ePw+Lp +
  PHT55370.1  67 HPTDEELITYYLLKKVLDSNFTA-RAIAEVDLNKCEPWELPVE 108
                 8*******************999.89**************942 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MIILCDQCKA NVRTMLLGDN TLDGYENVSG QKINKDMSVI YMHHGISEGD VITAEVTNGT  60
KTPIFSHPTD EELITYYLLK KVLDSNFTAR AIAEVDLNKC EPWELPVEAS LLKFEEILEG  120
VARLSLANDI EFEEQNFIAL MNEAREKRTK LGAPAPKIPL EIRTEKALDA IHVCCFGRNL  180
IEEEDEKLLI TMLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15170.15e-19NAC family protein