PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55373.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 361aa    MW: 39597.9 Da    PI: 8.5239
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.28.3e-3365122359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                   v YkeClkNhAaslG+havDGCgEf+ps++++ +++++lkCa CgCHRnFHRre+ee
   PHT55373.1  65 VVIYKECLKNHAASLGTHAVDGCGEFLPSPSSNpADPTSLKCAVCGCHRNFHRREPEE 122
                  589******************************9*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MDLTNNNNAT ATTTTTTTTT VKTPEGEIET PTQIQKVKPF PLSNGVLKRK NTLHHQHHQH  60
HHPVVVIYKE CLKNHAASLG THAVDGCGEF LPSPSSNPAD PTSLKCAVCG CHRNFHRREP  120
EEPVVVPPPP IATAVLEYQP HHRHHPPPPP PLPLPLPPRG GDHSSPNSPS PPPISSAYYP  180
ASAPHMLLAL SAGFTGEKNP NPTSAPLVAN SNGRKRFRTK FTPDQKVKML EFSESVGWKM  240
QKRDEDLVNN FCNEIGIEKG VLKVWMHNNK NTFGKKSDQH TSGEENNNNL SHNNGNSTNN  300
NVNGFCIVSR NNSHNNTNSE FHHHHHHGQS NSDNKKDIQG IIHQLHTSDS VVATNGSSSS  360
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.15e-59ZF-HD family protein