PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55379.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 455aa MW: 49925.8 Da PI: 7.6183

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55379.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	91.3	7.5e-29	207	265	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK +g+++prsYYrC+ a Cpv+k+v+r+ ed +++++tYeg+Hnh+ PHT55379.1 207 NDGCQWRKYGQKISRGNPCPRSYYRCSVApLCPVRKQVQRCLEDMSILITTYEGTHNHS 265 8*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MEKNLDNSLS GASAVKEIHN HEEDDIRKAL KDDEFKSALA EVNEVKLENA RLKMLLQQIE 60 NDYNSLQTRL FNICQPDLKK SVNPTCTSEK IADEEECELV SLRLGRSPSP SESKKVDKKR 120 TREDYHCVQS NDGLKLGLDY SSGVSESDLL KPNNNPSPGP TSEVVKTMRK GDDESVKKRA 180 GDDEVSQPNV KRARVSVRTK CDYPTINDGC QWRKYGQKIS RGNPCPRSYY RCSVAPLCPV 240 RKQVQRCLED MSILITTYEG THNHSLPIEA TAMASTTAAA ASMLLSGSST SSQSPKNFTN 300 LANYSKTTPL YLSNSSSSPF PTITLDFTAF PTTSSFTSFN FPSNFQPSSG LLSNSLSFSS 360 PESYTIPKIL GSGCLNYDST STLPYHKNLI NIGSSQKQFD QPFIGKNNTS TSDKLKEDSS 420 QQALTETLTK AITSDPSFQS VLAAAISSMV GATKT

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MEKNLDNSLS GASAVKEIHN HEEDDIRKAL KDDEFKSALA EVNEVKLENA RLKMLLQQIE  60
NDYNSLQTRL FNICQPDLKK SVNPTCTSEK IADEEECELV SLRLGRSPSP SESKKVDKKR  120
TREDYHCVQS NDGLKLGLDY SSGVSESDLL KPNNNPSPGP TSEVVKTMRK GDDESVKKRA  180
GDDEVSQPNV KRARVSVRTK CDYPTINDGC QWRKYGQKIS RGNPCPRSYY RCSVAPLCPV  240
RKQVQRCLED MSILITTYEG THNHSLPIEA TAMASTTAAA ASMLLSGSST SSQSPKNFTN  300
LANYSKTTPL YLSNSSSSPF PTITLDFTAF PTTSSFTSFN FPSNFQPSSG LLSNSLSFSS  360
PESYTIPKIL GSGCLNYDST STLPYHKNLI NIGSSQKQFD QPFIGKNNTS TSDKLKEDSS  420
QQALTETLTK AITSDPSFQS VLAAAISSMV GATKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	4e-61	WRKY family protein