PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55435.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 285aa MW: 30490.9 Da PI: 8.7116

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55435.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119	5.7e-37	44	137	7	89
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg............k 89 + +++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tgt++++as+ a++ +s+++ s + PHT55435.1 44 KRKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAVVSQQGISV-SaglvdvsgeniaG 137 689*************************************************************8885555555554222.13455444443331 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MDPNQPNFIN TSNNNIIIIK HADDQVKDDE IKKQQQQKQV AVPKRKDRHT KVEGRGRRIR 60 MPALCAARIF QLTRELGHKS DGETIQWLLQ QAEPSIIAAT GTGTIPASAL AAAAVVSQQG 120 ISVSAGLVDV SGENIAGSDS NRGSSNNRRT SWPMICGNLG RPHSASTGIW PAPPPVVTSF 180 GYQSSSAASS SSLGSETSNY YLQKIGFPGF DLPAATNMNP MSFTSILGGS NQQLPGLELG 240 LSQEGHIGVL NSQALNQIYA RMQHPQQDQQ NQQQSPANDS QGSGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	1e-59	TCP family protein