PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55681.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 336aa    MW: 38466.9 Da    PI: 8.8191
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55681.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.41.9e-06275320354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++ n  Er+RR ++++    L+ ++P a      +++ +++L +Av+Y+ksL
  PHT55681.1 275 TTSNCSERKRR-KLKKMVKALKGIVPGA-----SRMNTVTVLDEAVRYLKSL 320
                 678999***98.7**************9.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MLLSSQWLGL KTIIYCTGPI NMRWAFSSLS YCVKCVRFVI ARYPYFFFLK LKSTWRVRMY  60
IAITLKRYRA VKEAGEIKMH VGSVAYYQLM LVCQSNYHFS TQKPYVSLED QAAGGNIFDI  120
PPPSVYGTMA LPTGFRSSVP FHGFEFQSSE ACPKNFIIFD QTDYRSQIMY HPAMASKFPY  180
PDLNYNSTCF QDGMEKKIAN NENTEVSSYL KEDSDDINAL LSLEEEEHEE YDEEEVSTAR  240
TDANYGRSSP ESYSNYDCQS KKSRTSSFRK CSGSTTSNCS ERKRRKLKKM VKALKGIVPG  300
ASRMNTVTVL DEAVRYLKSL KVEVQKLGVE NLKTFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.12e-32bHLH family protein