PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55882.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

VOZ

Protein Properties

Length: 389aa MW: 43511 Da PI: 5.1883

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	416.1	6.1e-128	109	328	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpa gs+w+q dycs +ha+la neg +g pv+rp g++lkd+llf+alsak+qgk+vg+pec+gaatakspwna+elf PHT55882.1 109 PPPSAFLGPKCALWDCPRPAMGSDWCQkshDYCSDYHAALAPNEGFLGRPPVVRPMGVGLKDSLLFQALSAKAQGKNVGVPECKGAATAKSPWNAPELF 207 89*********************976668**************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 dl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+++gglkrsyymdpqp++++ewhlyeyein++da alyrlelklvd+kks PHT55882.1 208 DLEVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNDYGGLKRSYYMDPQPMKNLEWHLYEYEINKYDAWALYRLELKLVDGKKS 306 *********************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 +kgkv+k+s+adlqk++grlta PHT55882.1 307 PKGKVTKESVADLQKRMGRLTA 328 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
LYKLLLGEEE DDATSALAAP KPDPDGQKHD VDAAQKHDVA GFQEEQGYQL IDQCKSMPSV 60 DNNAGINNLG VATQLDYHSF DPQQDFDQFG FDALNLCLED DLPPIQISPP PSAFLGPKCA 120 LWDCPRPAMG SDWCQKSHDY CSDYHAALAP NEGFLGRPPV VRPMGVGLKD SLLFQALSAK 180 AQGKNVGVPE CKGAATAKSP WNAPELFDLE VVEGETIREW LFFDKPRRAF ESGNRKQRSL 240 PDYNGRGWHE SRKQVMNDYG GLKRSYYMDP QPMKNLEWHL YEYEINKYDA WALYRLELKL 300 VDGKKSPKGK VTKESVADLQ KRMGRLTAEF PLENKRIVKG RAKANTKDVA TNVHAAPNQT 360 VPVIEGFDYV AGAPFPDYLV DNFGGYYIT

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

LYKLLLGEEE DDATSALAAP KPDPDGQKHD VDAAQKHDVA GFQEEQGYQL IDQCKSMPSV  60
DNNAGINNLG VATQLDYHSF DPQQDFDQFG FDALNLCLED DLPPIQISPP PSAFLGPKCA  120
LWDCPRPAMG SDWCQKSHDY CSDYHAALAP NEGFLGRPPV VRPMGVGLKD SLLFQALSAK  180
AQGKNVGVPE CKGAATAKSP WNAPELFDLE VVEGETIREW LFFDKPRRAF ESGNRKQRSL  240
PDYNGRGWHE SRKQVMNDYG GLKRSYYMDP QPMKNLEWHL YEYEINKYDA WALYRLELKL  300
VDGKKSPKGK VTKESVADLQ KRMGRLTAEF PLENKRIVKG RAKANTKDVA TNVHAAPNQT  360
VPVIEGFDYV AGAPFPDYLV DNFGGYYIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-151	VOZ family protein