PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55991.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 179aa    MW: 19782.1 Da    PI: 8.7489
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.71.2e-071960244
         AP2  2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAak 44
                +ykGVr +++ +   + AeI  p   g++k+++lg+++t++eAa+
  PHT55991.1 19 RYKGVRKRRRVNGikYGAEIIKP---GQKKSIWLGTYDTKKEAAE 60
                69***8888777688****9998...557**************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MAEIQNSNAA VAVPPNEVRY KGVRKRRRVN GIKYGAEIIK PGQKKSIWLG TYDTKKEAAE  60
DRSYVSDIYG DRNDILPKNN RDIASSSKAG RDVLRTGEPN QINPQVPRFP TVNVGDAPFQ  120
PTDRDKYYVE LLTRGGVLFP NPVTFQKATV DFLSSDGDAD NGTAEDVDTE LQLAPLGNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12428RKRRR
22529KRRRV