PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55992.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 303aa    MW: 33378.5 Da    PI: 10.5027
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55992.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.82.6e-081970254
         AP2  2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                +y+GVr +++ +   + AeI  p   g++++++lg+++t+++Aa+ ++ a++ l+
  PHT55992.1 19 RYQGVRKRRRVNGikYGAEIIKP---GQKRSIWLGTYDTEKKAAQVYDTAARWLK 70
                699**8888766688****9998...557**********99*********98665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MAEIENDNAA VAVPPNTVRY QGVRKRRRVN GIKYGAEIIK PGQKRSIWLG TYDTEKKAAQ  60
VYDTAARWLK GPGAKLNFPH DDITEKAKDA SNELNPRNDV SNEGDKNNSN DIIPDESSGT  120
ASSSKAGDIT STTKASRRAL RIREPIKNPQ APRSKAGGGA LKIREPMNQN PQAKAHGGAL  180
RIQEKNQNPQ APHFAVDIVS SSNAGIDVLR TREPNQNPQV PRFLVVSGGD APFQPTYLDK  240
FYMEILTRAR ILFPSRVNFR KVTVDYLSDF HNHVGSSERV VQNQPPFTTA VYTGLRLAPL  300
GSK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12428RKRRR
22529KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.16e-15ERF family protein