PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55995.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 400aa    MW: 45259 Da    PI: 7.0574
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.41e-141665255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                ++kGVr  +  g++ AeI+d s   +r++++lg+f taeeAa a++ a++k++g
  PHT55995.1 16 RFKGVRKMP-CGSYIAEIKDSS---QRRYVWLGTFNTAEEAALAYDTAARKKYG 65
                69*******.7*********43...36***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MAQTKDKAPI PSIEVRFKGV RKMPCGSYIA EIKDSSQRRY VWLGTFNTAE EAALAYDTAA  60
RKKYGQRAKT NFPLTTEEYL QTIKDFLSRV NNKNVSDHIL PYKSNDIGSS SKTGGDELRF  120
RLPNQNPNEF RRFTTITGCS VWMSMVHDKC LLEALMKEGV LLPEPEINSQ NVPMDVTIID  180
ANNDESTNET LNLELCLALP GSKYLIWKPH TPKTVDCLIR IKGSEELLRK FSSVKVSKIS  240
GGLIYKQFDS LVFLLVHISE VKPKGWQKTK IEKTQKTFVE SDHKGFPGDD ALNVSSERDF  300
SKFSPGGDRG NGQDADMDSN SNEIVVDHES RITSHIGVDN FRYEDLNGSS LNSSGSSHYR  360
AFWDFFRRQD MPMLIEYLRF NWKKHGDSDH LTDDSVGQGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.12e-12ERF family protein