PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55996.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 208aa    MW: 22664.2 Da    PI: 8.6653
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.25e-192675255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GV+ ++ +gr++A+I dp   +k++r++lg+f+t+eeAa+a++ a+++++g
  PHT55996.1 26 RYRGVSKRP-WGRYAAHIVDP---NKKTRVWLGTFDTPEEAARAYDTAAREFRG 75
                69*******.*******9998...347************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MEQNKKIDTP VIVAAPATET RNKEVRYRGV SKRPWGRYAA HIVDPNKKTR VWLGTFDTPE  60
EAARAYDTAA REFRGTKAKT NFPPTLTPLN LSNHGGGSSV STAASFTDLK QTNQSRRLPI  120
TGVSAPTTAR DYRYLEDLTA AEVSNCEPSS QKGTVAFLGG GDSVSGCPTQ SESESESMFS  180
YSFNHVEKPT IATKGLHLDL NLPPPENM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.13e-34ERF family protein