PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56008.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HB-other

Protein Properties

Length: 1663aa MW: 187322 Da PI: 4.9407

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56008.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.2	1.4e-18	24	79	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t+ qle+Le++++++ yps++ r+eL++klgLt+rq ++WF+ rR k+k+ PHT56008.1 24 PKRQMKTPFQLETLERVYAMETYPSEAIRAELSEKLGLTDRQLQMWFCHRRLKDKN 79 69***************************************************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 1663 aa Download sequence
MDGGSEGEGN KNVNMSSSEG PKKPKRQMKT PFQLETLERV YAMETYPSEA IRAELSEKLG 60 LTDRQLQMWF CHRRLKDKNT SGGTEKKPRA GVTGVKRNAM ESPREDLMVA EAASDRGSGS 120 VSRSGSGSGS GSGSSRFDNG DDMPTKPIRH YESPRRAMER RVIACIETQL GETLREDGPI 180 IGVEFDELPP GAFGSPIDFG ERGDRYRHSY DSKLYGPYDA KVSVGTTLSL SPVLTSGHRE 240 PAEPKIVSDK YGQIAAPYLY DSPVDGPSKN APIMQGNGHF AREYGVEGQN IGVMSQQGRQ 300 GHFPSPQQDN KFVSSNEDFL QLDRKRKSED TRIGRDVQVN EKRIRKELEK QDLLRRKREE 360 QMKKDMEKQD RERRKEELRL MREQQRKEER YQREEKRELE RRERFMQKEL LRAERKKQKE 420 ELRKEREAAK QKAAMEKAMA RRIAKESMEL IEDERLELMD LAASSKGLPS IASLNYDALQ 480 NLDSFRESLC EFPPKSVQLK KPFSIQPWIA SDDNVGNLLM AWRFCLNFAD ILGLWPFTLD 540 EFLQAFHDYD SRLLAEIHIA LLKLIIKDIE DVARTPSGGP GTNQYNAINP EGGHPQIVEG 600 AYLWGFDIRN WQKHLNPLTW SEVLRQFALS AGFGPPLKKK SERTCLNDSD ESKGCEDIVS 660 TLRSGSAAEN AVAIMQEKGY MSQRKSRHRL TPGTVKFAAY HVLALEGDKG LNVLDIAERI 720 QKSGLRDLST SKTPEASISV ALSRDPILFE RIAPSTYNVR LAFRKDPADA DAIISAAKEK 780 ILRYANGFLS GQNVEDEERD DDSEGDAAEG PEVDDLGTPY GVNKNSEQLL DTCLVNGKSK 840 LSDEVARQIG VDVVGIEGSN PSQECSEIDE SKAGEPWVQG LTEGEYSDLC VEERLSALVS 900 LIGIANEGNS IRAILEDRLD AANALKKQMW AESQLDKRRL KEETVNRFND SSFNAVVEDS 960 QSPLGFTNNK NQGTSPTTLV KDESAVIVGN VQNHFESILA EKSSAAQETF VGQFAVPSGN 1020 TAERSRMQLK SFIGHKAEEM YVYRSLPLGQ DRRRNRYWLF VASGSSQDPG SGRIFFESPQ 1080 GCWRLIDTEE AFDRLLASLD TRGIRESHLH ILLQKIEGPF KERVRRNMSY VSSSPACGAS 1140 ADSPKSTIYG VSSDSWETSS SFKIEFGKNE EEKRNALMRY QGFQIWMWKE CLRSSIVRAL 1200 RYGKKRSLPL LGLCGHCLDS YLSEEGICPS CNKMSSKVDM NAKFLEQAMD SMDNMKFDCN 1260 SLMVSNACPL RARLMKAALS FLEVYVPYEA LQSSWTEDCR KTWGMKLQYS SSPEDLLQIL 1320 IQLEGAIKRD YLSADYETAE ELMGLCASSR NAACASTYES VPQLPWIPQT TAAVALRLLE 1380 LDASISYDPQ QKTEVELKNK VDCLPKPSLG YSSLKGLQKV EPTEIDHDGP LREENWDYLS 1440 NLPSSSRSRQ VFRGRGGGRP RKLQKGTASK LSESGRAVVR PTETLTQVLI KQGETHGQRH 1500 VRGRRTVRKR RIENKIVEET QPDYLGDRSS RLSLVVSPRK LVREEFDMNV EGIEATNDNS 1560 MSMEAAESDD SAPENTYEFN RSDLMEMSDE DQVVYAGDDI EDDEEEEEDN DDPDNDNDDR 1620 YRSHGQNLER YVNMDDDDDD SDRDGDVNED QELDSSESED YSD

Sequence ? help Back to Top

Protein Sequence Length: 1663 aa Download sequence

MDGGSEGEGN KNVNMSSSEG PKKPKRQMKT PFQLETLERV YAMETYPSEA IRAELSEKLG  60
LTDRQLQMWF CHRRLKDKNT SGGTEKKPRA GVTGVKRNAM ESPREDLMVA EAASDRGSGS  120
VSRSGSGSGS GSGSSRFDNG DDMPTKPIRH YESPRRAMER RVIACIETQL GETLREDGPI  180
IGVEFDELPP GAFGSPIDFG ERGDRYRHSY DSKLYGPYDA KVSVGTTLSL SPVLTSGHRE  240
PAEPKIVSDK YGQIAAPYLY DSPVDGPSKN APIMQGNGHF AREYGVEGQN IGVMSQQGRQ  300
GHFPSPQQDN KFVSSNEDFL QLDRKRKSED TRIGRDVQVN EKRIRKELEK QDLLRRKREE  360
QMKKDMEKQD RERRKEELRL MREQQRKEER YQREEKRELE RRERFMQKEL LRAERKKQKE  420
ELRKEREAAK QKAAMEKAMA RRIAKESMEL IEDERLELMD LAASSKGLPS IASLNYDALQ  480
NLDSFRESLC EFPPKSVQLK KPFSIQPWIA SDDNVGNLLM AWRFCLNFAD ILGLWPFTLD  540
EFLQAFHDYD SRLLAEIHIA LLKLIIKDIE DVARTPSGGP GTNQYNAINP EGGHPQIVEG  600
AYLWGFDIRN WQKHLNPLTW SEVLRQFALS AGFGPPLKKK SERTCLNDSD ESKGCEDIVS  660
TLRSGSAAEN AVAIMQEKGY MSQRKSRHRL TPGTVKFAAY HVLALEGDKG LNVLDIAERI  720
QKSGLRDLST SKTPEASISV ALSRDPILFE RIAPSTYNVR LAFRKDPADA DAIISAAKEK  780
ILRYANGFLS GQNVEDEERD DDSEGDAAEG PEVDDLGTPY GVNKNSEQLL DTCLVNGKSK  840
LSDEVARQIG VDVVGIEGSN PSQECSEIDE SKAGEPWVQG LTEGEYSDLC VEERLSALVS  900
LIGIANEGNS IRAILEDRLD AANALKKQMW AESQLDKRRL KEETVNRFND SSFNAVVEDS  960
QSPLGFTNNK NQGTSPTTLV KDESAVIVGN VQNHFESILA EKSSAAQETF VGQFAVPSGN  1020
TAERSRMQLK SFIGHKAEEM YVYRSLPLGQ DRRRNRYWLF VASGSSQDPG SGRIFFESPQ  1080
GCWRLIDTEE AFDRLLASLD TRGIRESHLH ILLQKIEGPF KERVRRNMSY VSSSPACGAS  1140
ADSPKSTIYG VSSDSWETSS SFKIEFGKNE EEKRNALMRY QGFQIWMWKE CLRSSIVRAL  1200
RYGKKRSLPL LGLCGHCLDS YLSEEGICPS CNKMSSKVDM NAKFLEQAMD SMDNMKFDCN  1260
SLMVSNACPL RARLMKAALS FLEVYVPYEA LQSSWTEDCR KTWGMKLQYS SSPEDLLQIL  1320
IQLEGAIKRD YLSADYETAE ELMGLCASSR NAACASTYES VPQLPWIPQT TAAVALRLLE  1380
LDASISYDPQ QKTEVELKNK VDCLPKPSLG YSSLKGLQKV EPTEIDHDGP LREENWDYLS  1440
NLPSSSRSRQ VFRGRGGGRP RKLQKGTASK LSESGRAVVR PTETLTQVLI KQGETHGQRH  1500
VRGRRTVRKR RIENKIVEET QPDYLGDRSS RLSLVVSPRK LVREEFDMNV EGIEATNDNS  1560
MSMEAAESDD SAPENTYEFN RSDLMEMSDE DQVVYAGDDI EDDEEEEEDN DDPDNDNDDR  1620
YRSHGQNLER YVNMDDDDDD SDRDGDVNED QELDSSESED YSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein