PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56194.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 246aa    MW: 27553.2 Da    PI: 6.2589
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56194.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.70.000111041361954
                 HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +f+eL ++l +    +++K++K+ iL  Av+ + +L
  PHT56194.1 104 WFQELSSILEPG---KQPKMDKSVILGDAVRMVVQL 136
                 8**********9...9**************987766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MAEADEDGSN WLVEFGLMEV LPSLEVQSNP QWPSNAFSLP NNLSSGLEDS YGNSDSLKES  60
GSKKRVRSGT CASDSKAHRE KMRRDKLNDR QTHSLSPSLF LCAWFQELSS ILEPGKQPKM  120
DKSVILGDAV RMVVQLRDEA QKLKESYDNL QEKVNELKAE KSELRDEKQK LKAEKDKLEQ  180
HLKALNSQPG FLPHPPAMPS PFPAPHQVFA SKMMPYLGYP GIPMWQFVPP AAVDTSEDHA  240
LRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.13e-69bHLH family protein