PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56367.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 552aa MW: 60102.4 Da PI: 7.3716

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	296	354	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ PHT56367.1 296 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGTHNHP 354 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MDKGWGLTLE SSSSSDKVGF FMNKPVFGFN LSPRLNPAEM FPSSDDKRAI VNEVDFFSEK 60 KPIVKKENSQ GDRTDQCVVN TGLQLVIANA GSDQSTVDDG ISSELVLEDK RAKIQLAQLQ 120 VELQRMNSEN QRLKGMLTQV NNSYSALQMH LVTLMQQQQQ QQQQQMISRT ESTHAHEVVE 180 AKFNDEKNQE KERTIVPRQF MELGPSGSKA DPLDEPSNSH TSSEERTLSG SPRNNMELLS 240 RDKAIGREES PESESWAPNK VPKLMNSSKP VEQPTEATMR KARVSVRARS EAPMISDGCQ 300 WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR TILITTYEGT HNHPLPPAAM 360 AMASTTSAAA NMLLSGSMPS ADGLMNTNFL ARAMLPCSSN MATISASAPF PTVTLDLTAQ 420 NSNAALPNYH QRVNHANNAQ FQFPLPAGLN HPNFIASMSA PQMPQVLGQA MYNQSKFSGL 480 QVSQDNIHHP SISHDTLSAA TAAITADPNF TAALAAAISS IIGGGSHPNN NGNSTMSGPS 540 SNNNNTSSFP GN

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MDKGWGLTLE SSSSSDKVGF FMNKPVFGFN LSPRLNPAEM FPSSDDKRAI VNEVDFFSEK  60
KPIVKKENSQ GDRTDQCVVN TGLQLVIANA GSDQSTVDDG ISSELVLEDK RAKIQLAQLQ  120
VELQRMNSEN QRLKGMLTQV NNSYSALQMH LVTLMQQQQQ QQQQQMISRT ESTHAHEVVE  180
AKFNDEKNQE KERTIVPRQF MELGPSGSKA DPLDEPSNSH TSSEERTLSG SPRNNMELLS  240
RDKAIGREES PESESWAPNK VPKLMNSSKP VEQPTEATMR KARVSVRARS EAPMISDGCQ  300
WRKYGQKMAK GNPCPRAYYR CTMAVGCPVR KQVQRCAEDR TILITTYEGT HNHPLPPAAM  360
AMASTTSAAA NMLLSGSMPS ADGLMNTNFL ARAMLPCSSN MATISASAPF PTVTLDLTAQ  420
NSNAALPNYH QRVNHANNAQ FQFPLPAGLN HPNFIASMSA PQMPQVLGQA MYNQSKFSGL  480
QVSQDNIHHP SISHDTLSAA TAAITADPNF TAALAAAISS IIGGGSHPNN NGNSTMSGPS  540
SNNNNTSSFP GN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-137	WRKY family protein