PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56406.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 271aa MW: 30444 Da PI: 5.8648

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69	5.9e-22	91	151	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+t+ ql++Le+ Fe+ n +ps+++++e++++l +++e++V++WFqNrRa+ k+ PHT56406.1 91 RQRWTPTPMQLQILERIFEQgNGTPSKQKIKEITSELsqhgQISETNVYNWFQNRRARSKR 151 89***************99************************************97 PP
2	Wus_type_Homeobox	101.8	4.9e-33	91	153	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtPtp Q++iLe+++++G tP+k++i++it+eL+++G+i+++NV++WFQNr+aR+++kq PHT56406.1 91 RQRWTPTPMQLQILERIFEQGNGTPSKQKIKEITSELSQHGQISETNVYNWFQNRRARSKRKQ 153 89***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MEWDKQQQQP PAQPQTAEEL NGGGGGMFVK VMTDEQMEVL RKQIAVYATI CEQLVDLHKS 60 MATQHDLAGV RLGNLYCDPL VTSAGHKITG RQRWTPTPMQ LQILERIFEQ GNGTPSKQKI 120 KEITSELSQH GQISETNVYN WFQNRRARSK RKQQVAATNN NESEVETEVE SPNEKKTKPE 180 DLQSSHMPTS MAEDLGYQNP EVSSGMHTLD PRTSKPEPMF PSDGSSKSAG SYGQMSFYGM 240 SNPRMDQIMG KMEVPGSYHP YLHAEDYNMT G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	145	153	RRARSKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35550.1	8e-80	WOX family protein