PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56556.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 281aa    MW: 32283.1 Da    PI: 9.5377
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56556.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-172978255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+GV ++  +g+WvAeIr+p++   r+r +lg+f tae+Aa a+++a+++++g
  PHT56556.1 29 EYRGVQQRT-WGKWVAEIREPKK---RTRMWLGSFATAEQAAMAYDEAARRFYG 78
                69***9988.**********965...5***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MDNYKRNPLK PWKKGPARGK GGPQNAQCEY RGVQQRTWGK WVAEIREPKK RTRMWLGSFA  60
TAEQAAMAYD EAARRFYGPD AYLNLPHMRA NFNPLNKSQK FKWFSSSNVF TNSTGLLNLC  120
AQPNVHVIHQ RLQELKRTEA AVSFSSPSSS DPKNEIQNYT KQPHLRIPQV KEKKEVEFSK  180
RNKAVVHDQE KPQIDLNEFL QQIGQLKRDD QQPDKSQDRN ISCFTDSGVS LKDDISVANF  240
YADNYNWDTM GAITGTAEAS SFVDAYNLND ELMYSSSIWN F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.13e-60ERF family protein