PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56568.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 218aa    MW: 25487 Da    PI: 6.8513
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.61.1e-1471384128
         NAM   4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                 G+rFhPtd+e +  +L + v++++++ + +  +++d+y k +P+++  +   +++ +++++  yf +k+++++ +g+  n     g Wk++ + ++++ 
  PHT56568.1   7 GYRFHPTDSEGL-TFLLRFVAKQEMHDSGFiTTNIDVYgKQKPREIYsHgvpCAD-DDDSCyrYFITKKSNTTYHGEVGNT---LGSWKQQDEGQPIHY 100
                 9*********99.7888888888877777735566*994569****733554333.4445523566666555555555444...499***********9 PP

         NAM  95 kkgel......vglkktLvfykgrapkgektdWvmheyrl 128
                 +kg+       +g+k+ + +  +++++     W+m+e++l
  PHT56568.1 101 NKGKSssstpvIGCKRRMRYMIKDHKD--DGLWLMKEFEL 138
                 85554667777*********9554444..89*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MEKKGLGYRF HPTDSEGLTF LLRFVAKQEM HDSGFITTNI DVYGKQKPRE IYSHGVPCAD  60
DDDSCYRYFI TKKSNTTYHG EVGNTLGSWK QQDEGQPIHY NKGKSSSSTP VIGCKRRMRY  120
MIKDHKDDGL WLMKEFELSN VILKRFDEDR RDYVLCAIKK KPIDTCPFEM NYDSDETDEV  180
TCSNDNDNTM CRDLLMMFLF WKISRVLLSC AFLLYSLH