PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56584.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 264aa    MW: 29038.2 Da    PI: 8.5127
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56584.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.5e-20142176135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  PHT56584.1 142 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 176
                 ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MMHRCSGSMV GPCSCGLFHS QTGTTTTTSS AFSMLFSHNH HTTFDHECSE NMYSFAPSSS  60
SVDCTLSLGT PSTRLTNLEN EKKLVYSNDQ RRRSSSKCMS NFWDILHPKQ HMTTPSSAHK  120
STRGGSNGSS NSTTDPLVAR RCANCDTTST PLWRNGPRGP KSLCNACGIR FKKEERRASA  180
AAAATANGGG GIETHQHMIN SSTTSWVHHQ PPKMPCFSSA NYGNEFRFIE DNDHHRDSDT  240
AGISFLPWRL SVADRPSLVH DFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-57GATA family protein