PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56587.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 243aa    MW: 26714.6 Da    PI: 10.0432
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56587.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA25.71.6e-08139155117
        GATA   1 CsnCgttkTplWRrgpd 17 
                 C+nC tt+TplWR+gp+
  PHT56587.1 139 CANCDTTSTPLWRNGPS 155
                 ***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MMHRCSGSIV GPCSCGLFHS QTGSTTTSSS PCSSLITTLH LIMNIQKTCT RSFAPSSSSV  60
DCTLSLGTPS TRLTNLDNEK KLVYSNDQRR SSSKCMSNFW DILHPKQHMT TPSSAHKPTR  120
GGSSGNNNST NDPLVARRCA NCDTTSTPLW RNGPSHYAMR VEFVSRRKRD SWKKNGISQL  180
MTCHDMVMMC DASRVGLSCV LMQRGKANVV VDALSKLSMG SGAHVKDDKK KLVQFWKFIS  240
LPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.12e-23GATA family protein