PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56620.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 367aa    MW: 40735.2 Da    PI: 6.3721
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56620.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.47e-052703081255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ ++++ L +l+ +      +K + a++L++A+ YI+ Lq
  PHT56620.1 270 RKEKLGDRISALHRLVAPF-----GKTDTASVLTEAIGYIQFLQ 308
                 6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
MDSTNLHNHR QLQQQQQLSG YPFFAGVSTL HDWNSTMTSE EEYYYKGRMK RSIGTFPLMN  60
TSMFQDGHQL SNVQLDYKNN KAGCIISNDY FLKMKDMNGL SNNLFKESYF GNEQQHAFDL  120
NENLLSEDSY MNNAKTSIAF SGLAAAADAT NSSYISSNDM EHTDFQGLKL AYDGLTFKNS  180
ISGHDSNGNS FGHFSTDRMF ADGLPESAHS PSSNSSNKII ESNVSNTIGV SLKAKRSNYS  240
AEEEATPCQE ASKKPRVTSQ SSSTFTLKVR KEKLGDRISA LHRLVAPFGK TDTASVLTEA  300
IGYIQFLQDQ ILTLSMPYTK SSQGKLHHVD LKDSSIDTKC QPVLDLESRG LCLVPTSFTS  360
YITSSCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-33bHLH family protein